MLOC_59320 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains399.62304.246299.328370.8
LEAShoots from the seedlings (10 cm shoot stage)117.49977.6098118.02396.2168
INF1Young developing inflorescences (5mm)286.428277.977226.092260.724
INF2Developing inflorescences (1-1.5 cm)119.385143.097132.567165.531
ROORoots from the seedlings (10 cm shoot stage)237.237266.088303.67374.989
NODDeveloping tillers at six leaf stage, 3rd internode16.76557.9719313.863629.7842
CAR5Developing grain, bracts removed (5 DPA)133.417149.977124.01154.388
CAR15Developing grain, bracts removed (15 DPA)33.414434.110925.901687.8443



CDS Structure of MLOC_59320






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59320.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252507.1NoneNoneNoneNone
MLOC_59320.1CUST_18193_PI427708080AvailableAvailablecontig_43474 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g32920.1 -3 3e-96 283 139/140 (99%) 13110.m02891 protein ribosomal protein, putative, expressed
TAIR PP10 AT3G04400.1 -3 1e-95 280 137/140 (98%) | Symbols: emb2171 | Ribosomal protein L14p/L23e family protein | chr3:1167339-1168308 FORWARD LENGTH=140