- Predicted Gene MLOC_59320
MLOC_59320 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 399.62 | 304.246 | 299.328 | 370.8 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 117.499 | 77.6098 | 118.023 | 96.2168 |
INF1 | Young developing inflorescences (5mm) | 286.428 | 277.977 | 226.092 | 260.724 |
INF2 | Developing inflorescences (1-1.5 cm) | 119.385 | 143.097 | 132.567 | 165.531 |
ROO | Roots from the seedlings (10 cm shoot stage) | 237.237 | 266.088 | 303.67 | 374.989 |
NOD | Developing tillers at six leaf stage, 3rd internode | 16.7655 | 7.97193 | 13.8636 | 29.7842 |
CAR5 | Developing grain, bracts removed (5 DPA) | 133.417 | 149.977 | 124.01 | 154.388 |
CAR15 | Developing grain, bracts removed (15 DPA) | 33.4144 | 34.1109 | 25.9016 | 87.8443 |
CDS Structure of MLOC_59320
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59320.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g32920.1 |
-3 |
3e-96 |
283 |
139/140 (99%) |
13110.m02891 protein ribosomal protein, putative, expressed |
TAIR PP10 |
AT3G04400.1 |
-3 |
1e-95 |
280 |
137/140 (98%) |
| Symbols: emb2171 | Ribosomal protein L14p/L23e family protein | chr3:1167339-1168308 FORWARD LENGTH=140 |