MLOC_59316 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains109.97968.485580.448384.6405
LEAShoots from the seedlings (10 cm shoot stage)28.23936.3236714.617813.7418
INF1Young developing inflorescences (5mm)0.1584740.07253430.08023850.0954187
INF2Developing inflorescences (1-1.5 cm)0.1635030.1587790.1631710.192924
ROORoots from the seedlings (10 cm shoot stage)68.657341.31433.150251.0662
NODDeveloping tillers at six leaf stage, 3rd internode141.731252.85364.6407605.487
CAR5Developing grain, bracts removed (5 DPA)62.048862.140662.707164.9584
CAR15Developing grain, bracts removed (15 DPA)0.3250810.2205780.421840.782596



CDS Structure of MLOC_59316






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59316.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59316.1CUST_8133_PI427708083AvailableAvailablecontig_43469 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g45920.1 +1 0.0 600 310/315 (98%) 13103.m04936 protein tubulin/FtsZ domain containing protein, putative, expressed
TAIR PP10 AT5G23860.2 +1 0.0 592 305/315 (97%) | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449