MLOC_59307 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.664478.587298.240417.34025
LEAShoots from the seedlings (10 cm shoot stage)20.842316.269316.268914.6539
INF1Young developing inflorescences (5mm)18.034917.093620.659614.5575
INF2Developing inflorescences (1-1.5 cm)24.305725.810425.352225.8566
ROORoots from the seedlings (10 cm shoot stage)2.106595.953614.522075.7673
NODDeveloping tillers at six leaf stage, 3rd internode0.6169681.039862.90654.3186
CAR5Developing grain, bracts removed (5 DPA)6.501877.635447.749156.57545
CAR15Developing grain, bracts removed (15 DPA)1.143381.001441.700972.61248



CDS Structure of MLOC_59307






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59307.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358715NoneNoneNoneNone
MLOC_59307.1CUST_4113_PI427708080AvailableAvailablecontig_43458 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g14120.1 -2 0.0 1065 532/599 (89%) 13102.m01574 protein BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
TAIR PP10 AT5G45780.1 -2 0.0 714 378/601 (63%) Leucine-rich repeat protein kinase family protein | chr5:18566946-18569625 REVERSE LENGTH=614