- Predicted Gene MLOC_59307
MLOC_59307 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.66447 | 8.58729 | 8.24041 | 7.34025 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.8423 | 16.2693 | 16.2689 | 14.6539 |
INF1 | Young developing inflorescences (5mm) | 18.0349 | 17.0936 | 20.6596 | 14.5575 |
INF2 | Developing inflorescences (1-1.5 cm) | 24.3057 | 25.8104 | 25.3522 | 25.8566 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.10659 | 5.95361 | 4.52207 | 5.7673 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.616968 | 1.03986 | 2.9065 | 4.3186 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.50187 | 7.63544 | 7.74915 | 6.57545 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.14338 | 1.00144 | 1.70097 | 2.61248 |
CDS Structure of MLOC_59307
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59307.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g14120.1 |
-2 |
0.0 |
1065 |
532/599 (89%) |
13102.m01574 protein BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed |
TAIR PP10 |
AT5G45780.1 |
-2 |
0.0 |
714 |
378/601 (63%) |
Leucine-rich repeat protein kinase family protein | chr5:18566946-18569625 REVERSE LENGTH=614 |