MLOC_59294 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5666990.8280340.4796290.667702
LEAShoots from the seedlings (10 cm shoot stage)0.2373870.5095890.6017130.374439
INF1Young developing inflorescences (5mm)0.8989980.82830.7618860.706263
INF2Developing inflorescences (1-1.5 cm)0.5547060.7387490.6141270.702299
ROORoots from the seedlings (10 cm shoot stage)0.5681670.6127520.488780.683895
NODDeveloping tillers at six leaf stage, 3rd internode0.1138780.1851010.2633760.577867
CAR5Developing grain, bracts removed (5 DPA)0.4983530.7918630.7362750.677249
CAR15Developing grain, bracts removed (15 DPA)0.8276370.9021050.6534411.89669



CDS Structure of MLOC_59294






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59294.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374698NoneNoneNoneNone
MLOC_59294.1CUST_18192_PI427708080AvailableAvailablecontig_43442 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g39460.2 +1 0.0 919 483/634 (76%) 13110.m03615 protein selenium-binding protein-like, putative, expressed
TAIR PP10 AT3G25060.1 +1 5e-156 485 251/511 (49%) Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:9128516-9130321 FORWARD LENGTH=601