MLOC_59286 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.854477.143218.72417.80642
LEAShoots from the seedlings (10 cm shoot stage)8.5279212.95988.9038.79928
INF1Young developing inflorescences (5mm)0.04058850.04583830.04921870.0440248
INF2Developing inflorescences (1-1.5 cm)0.04334360.02709040.01774720.0379515
ROORoots from the seedlings (10 cm shoot stage)7.619418.474087.5296810.0718
NODDeveloping tillers at six leaf stage, 3rd internode2.558963.634566.1648711.918
CAR5Developing grain, bracts removed (5 DPA)1.459792.108141.967642.00868
CAR15Developing grain, bracts removed (15 DPA)0.6248690.8553950.5974851.91026



CDS Structure of MLOC_59286






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59286.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357222NoneNoneNoneNone
MLOC_59286.1CUST_4106_PI427708080AvailableAvailablecontig_43431 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g43240.2 -2 0.0 859 463/627 (74%) 13105.m04551 protein jacalin-like lectin domain containing protein, expressed
TAIR PP10 AT1G19715.1 -2 2e-157 477 282/605 (47%) Mannose-binding lectin superfamily protein | chr1:6816934-6819432 REVERSE LENGTH=595