MLOC_5928 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7689271.481631.215210.793134
LEAShoots from the seedlings (10 cm shoot stage)1.377641.286191.362760.802195
INF1Young developing inflorescences (5mm)1.700431.638931.815320.980674
INF2Developing inflorescences (1-1.5 cm)2.545662.832292.460842.04945
ROORoots from the seedlings (10 cm shoot stage)0.1811320.9257680.9229940.558753
NODDeveloping tillers at six leaf stage, 3rd internode0.4694560.5986240.7683911.40821
CAR5Developing grain, bracts removed (5 DPA)3.739323.986733.825332.47478
CAR15Developing grain, bracts removed (15 DPA)5.04444.837034.21797.51688



CDS Structure of MLOC_5928






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5928.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_5928.1CUST_13961_PI427708080AvailableAvailablecontig_136873 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g15160.1 +3 2e-63 227 150/348 (43%) 13102.m01688 protein OsFBX40 - F-box domain containing protein, expressed
TAIR PP10None-----