MLOC_5927 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.70431 | 2.77436 | 2.56192 | 2.41337 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.89536 | 2.93353 | 2.16366 | 2.22665 |
| INF1 | Young developing inflorescences (5mm) | 3.32472 | 4.38881 | 4.26055 | 3.29277 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.89435 | 6.63375 | 5.95471 | 6.61446 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.30638 | 2.18446 | 2.95042 | 2.68883 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.12574 | 2.69046 | 2.56207 | 8.3841 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.42625 | 3.0948 | 2.80196 | 2.64145 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 106.528 | 124.417 | 85.3894 | 242.022 |
CDS Structure of MLOC_5927
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5927.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g17780.1 |
-2 |
0.0 |
1027 |
509/751 (68%) |
13102.m01986 protein ent-kaurene synthase, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT4G02780.1 |
-2 |
0.0 |
681 |
334/588 (57%) |
| Symbols: GA1, ABC33, ATCPS1, CPS, CPS1 | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr4:1237881-1244766 REVERSE LENGTH=802 |
