MLOC_59252 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.484826.119523.166425.0434
LEAShoots from the seedlings (10 cm shoot stage)4.196111.216271.032721.75952
INF1Young developing inflorescences (5mm)26.606921.575219.793420.8297
INF2Developing inflorescences (1-1.5 cm)10.12415.530816.271916.1817
ROORoots from the seedlings (10 cm shoot stage)19.131522.146317.555724.5802
NODDeveloping tillers at six leaf stage, 3rd internode1.123460.7425090.04881881.45096
CAR5Developing grain, bracts removed (5 DPA)22.249521.889516.965621.0501
CAR15Developing grain, bracts removed (15 DPA)4.331295.31853.9002612.131



CDS Structure of MLOC_59252






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59252.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249205.1NoneNoneNoneNone
MLOC_59252.1CUST_18191_PI427708080AvailableAvailablecontig_43410 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g37080.1 -3 0.0 956 472/552 (86%) 13106.m03838 protein L-ascorbate oxidase precursor, putative, expressed
TAIR PP10 AT5G21105.1 -3 0.0 722 347/548 (63%) Plant L-ascorbate oxidase | chr5:7172727-7177409 FORWARD LENGTH=588