- Predicted Gene MLOC_59218
MLOC_59218 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59218_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59218_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.58963 | 5.38794 | 5.92923 | 4.41566 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.95981 | 3.90351 | 4.7556 | 3.00084 |
INF1 | Young developing inflorescences (5mm) | 6.6431 | 5.40468 | 6.01148 | 4.44975 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.59707 | 5.03637 | 4.61722 | 5.04793 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.06332 | 6.14252 | 6.04195 | 5.96 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.16227 | 3.67598 | 3.96474 | 11.3831 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.90179 | 5.22348 | 5.52714 | 4.45275 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.90404 | 3.57956 | 3.65263 | 7.39797 |
CDS Structure of MLOC_59218
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59218.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g38940.2 |
-2 |
5e-154 |
452 |
222/387 (57%) |
13106.m04035 protein RMD5 homolog A, putative, expressed |
TAIR PP10 |
AT4G37880.1 |
-2 |
7e-113 |
346 |
175/392 (45%) |
LisH/CRA/RING-U-box domains-containing protein | chr4:17810183-17811349 FORWARD LENGTH=388 |