- Predicted Gene MLOC_59202
MLOC_59202 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59202_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59202_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 55.5032 | 55.5692 | 55.877 | 44.7837 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 36.0259 | 21.9751 | 22.4446 | 19.9952 |
INF1 | Young developing inflorescences (5mm) | 53.8506 | 53.2629 | 54.0325 | 35.4722 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.423 | 35.6411 | 36.1607 | 30.9346 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.6812 | 37.7469 | 26.691 | 30.5709 |
NOD | Developing tillers at six leaf stage, 3rd internode | 25.8684 | 26.4759 | 19.4338 | 73.4142 |
CAR5 | Developing grain, bracts removed (5 DPA) | 45.5014 | 49.099 | 51.432 | 37.4704 |
CAR15 | Developing grain, bracts removed (15 DPA) | 12.5651 | 12.771 | 14.8023 | 22.3441 |
CDS Structure of MLOC_59202
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59202.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g19470.1 |
+3 |
4e-119 |
382 |
191/228 (84%) |
13101.m02118 protein nodal modulator 1 precursor, putative, expressed |
TAIR PP10 |
AT3G62360.1 |
+3 |
1e-70 |
246 |
125/228 (55%) |
Carbohydrate-binding-like fold | chr3:23073020-23080455 REVERSE LENGTH=1227 |