MLOC_59202 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains55.503255.569255.87744.7837
LEAShoots from the seedlings (10 cm shoot stage)36.025921.975122.444619.9952
INF1Young developing inflorescences (5mm)53.850653.262954.032535.4722
INF2Developing inflorescences (1-1.5 cm)33.42335.641136.160730.9346
ROORoots from the seedlings (10 cm shoot stage)14.681237.746926.69130.5709
NODDeveloping tillers at six leaf stage, 3rd internode25.868426.475919.433873.4142
CAR5Developing grain, bracts removed (5 DPA)45.501449.09951.43237.4704
CAR15Developing grain, bracts removed (15 DPA)12.565112.77114.802322.3441



CDS Structure of MLOC_59202






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59202.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59202.1NoneAvailableAvailablecontig_43360 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g19470.1 +3 4e-119 382 191/228 (84%) 13101.m02118 protein nodal modulator 1 precursor, putative, expressed
TAIR PP10 AT3G62360.1 +3 1e-70 246 125/228 (55%) Carbohydrate-binding-like fold | chr3:23073020-23080455 REVERSE LENGTH=1227