MLOC_59198 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.506821.209717.824524.9884
LEAShoots from the seedlings (10 cm shoot stage)23.046125.608119.537125.3966
INF1Young developing inflorescences (5mm)52.850747.28744.824149.0717
INF2Developing inflorescences (1-1.5 cm)67.159361.92257.883685.0348
ROORoots from the seedlings (10 cm shoot stage)6.2776112.177311.427821.512
NODDeveloping tillers at six leaf stage, 3rd internode6.493025.7216611.264430.0929
CAR5Developing grain, bracts removed (5 DPA)34.229537.727635.536746.2949
CAR15Developing grain, bracts removed (15 DPA)22.482921.595217.007358.3637



CDS Structure of MLOC_59198






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59198.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375214NoneNoneNoneNone
MLOC_59198.1CUST_330_PI427708083AvailableAvailablecontig_43357 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g19980.1 -1 2e-72 253 194/392 (49%) 13106.m02132 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT5G41020.1 -1 7e-31 129 65/156 (42%) myb family transcription factor | chr5:16425883-16427649 REVERSE LENGTH=588