MLOC_59183 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.659653.953383.948515.27955
LEAShoots from the seedlings (10 cm shoot stage)12.35082.991423.353635.81605
INF1Young developing inflorescences (5mm)0.129911000.119301
INF2Developing inflorescences (1-1.5 cm)0.30972800.1689240.416654
ROORoots from the seedlings (10 cm shoot stage)14.0117.26121.732631.098
NODDeveloping tillers at six leaf stage, 3rd internode72.564232.448621.6722106.549
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_59183






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59183.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59183.1CUST_12834_PI427708083AvailableAvailablecontig_43343 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g50720.1 +3 3e-20 84 37/38 (97%) 13101.m05281 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT5G26660.1 +3 2e-15 71 31/37 (84%) | Symbols: ATMYB86, MYB86 | myb domain protein 86 | chr5:9331775-9333044 REVERSE LENGTH=352