- Predicted Gene MLOC_59179
MLOC_59179 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.6657 | 20.0282 | 17.1635 | 19.4142 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.8884 | 5.58152 | 7.68055 | 6.87196 |
| INF1 | Young developing inflorescences (5mm) | 36.8952 | 42.0843 | 38.6583 | 33.0352 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.0557 | 26.8408 | 26.9664 | 27.5548 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.7943 | 18.8895 | 19.687 | 20.5139 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.88642 | 3.94324 | 9.14092 | 15.3911 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 19.0432 | 20.1684 | 18.2736 | 18.5961 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.37089 | 3.37923 | 2.95101 | 7.59788 |
CDS Structure of MLOC_59179
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59179.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g30640.1 |
+1 |
8e-131 |
383 |
206/221 (93%) |
13110.m02644 protein translin, putative, expressed |
| TAIR PP10 |
AT2G37020.1 |
+1 |
1e-100 |
305 |
157/214 (73%) |
Translin family protein | chr2:15546514-15548792 FORWARD LENGTH=308 |