- Predicted Gene MLOC_59171
MLOC_59171 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.33427 | 9.94917 | 8.66081 | 10.0216 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.3653 | 13.5478 | 10.5648 | 11.5748 |
| INF1 | Young developing inflorescences (5mm) | 21.4132 | 16.5333 | 14.3205 | 16.489 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.9317 | 18.6026 | 17.2595 | 22.893 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.79611 | 10.3512 | 7.40789 | 13.9651 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.07214 | 8.43295 | 7.6354 | 31.9179 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.6805 | 13.7658 | 14.375 | 16.11 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.58552 | 8.70042 | 9.05013 | 23.5301 |
CDS Structure of MLOC_59171
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59171.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g02680.1 |
-1 |
0.0 |
1449 |
874/1279 (68%) |
13105.m00240 protein nuclear factor related to kappa-B-binding protein, related, putative, expressed |
| TAIR PP10 |
AT3G45830.1 |
-1 |
9e-133 |
446 |
230/322 (71%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in 100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi - 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131 (source: NCBI BLink). | chr3:16841277-16845173 FORWARD LENGTH=1298 |