MLOC_59151 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.291827.148187.524986.00159
LEAShoots from the seedlings (10 cm shoot stage)8.526825.988184.974665.08012
INF1Young developing inflorescences (5mm)8.888899.647899.364766.95095
INF2Developing inflorescences (1-1.5 cm)9.5972410.36999.388199.4475
ROORoots from the seedlings (10 cm shoot stage)5.55696.26535.707926.60238
NODDeveloping tillers at six leaf stage, 3rd internode9.0977811.0329.4320932.3622
CAR5Developing grain, bracts removed (5 DPA)10.522910.164511.39389.03105
CAR15Developing grain, bracts removed (15 DPA)7.843417.241878.1157915.3874



CDS Structure of MLOC_59151






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59151.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363262NoneNoneNoneNone
MLOC_59151.1CUST_4086_PI427708080AvailableAvailablecontig_43307 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g30810.1 -2 0.0 951 621/813 (76%) 13107.m03105 protein nucleobase-ascorbate transporter, putative, expressed
TAIR PP10 AT4G38050.1 -2 0.0 617 351/550 (64%) Xanthine/uracil permease family protein | chr4:17869529-17872461 REVERSE LENGTH=709