- Predicted Gene MLOC_59149
MLOC_59149 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59149_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1638.54 | 1574.61 | 1579.3 | 1642.19 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 146.747 | 114.281 | 66.1525 | 88.6276 |
INF1 | Young developing inflorescences (5mm) | 166.097 | 168.479 | 142.192 | 147.912 |
INF2 | Developing inflorescences (1-1.5 cm) | 99.2442 | 117.448 | 113.529 | 129.89 |
ROO | Roots from the seedlings (10 cm shoot stage) | 273.432 | 238.201 | 214.78 | 279.098 |
NOD | Developing tillers at six leaf stage, 3rd internode | 293.189 | 240.406 | 108.862 | 564.03 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1751.03 | 1985.27 | 1877.08 | 1981.28 |
CAR15 | Developing grain, bracts removed (15 DPA) | 162.812 | 140.056 | 130.403 | 380.864 |
CDS Structure of MLOC_59149
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59149.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g48490.2 |
+1 |
0.0 |
525 |
252/306 (82%) |
13107.m05192 protein stress responsive protein, putative, expressed |
TAIR PP10 |
AT2G39050.1 |
+1 |
6e-59 |
202 |
91/148 (61%) |
hydroxyproline-rich glycoprotein family protein | chr2:16303427-16305336 FORWARD LENGTH=317 |