MLOC_59127 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.631421.242191.107631.35209
LEAShoots from the seedlings (10 cm shoot stage)68.683683.211190.349865.572
INF1Young developing inflorescences (5mm)3.243532.625592.975922.6951
INF2Developing inflorescences (1-1.5 cm)1.149160.7456731.516751.28161
ROORoots from the seedlings (10 cm shoot stage)5.41332.827794.329583.83304
NODDeveloping tillers at six leaf stage, 3rd internode17.565816.219122.911246.8671
CAR5Developing grain, bracts removed (5 DPA)4.190214.545914.221584.69284
CAR15Developing grain, bracts removed (15 DPA)1.722442.674792.360156.23563



CDS Structure of MLOC_59127






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59127.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360485NoneNoneNoneNone
MLOC_59127.1CUST_18186_PI427708080AvailableAvailablecontig_43288 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g54630.1 -1 9e-50 173 111/189 (59%) 13104.m05653 protein expressed protein
TAIR PP10 AT2G21970.1 -1 1e-34 130 85/189 (45%) | Symbols: SEP2 | stress enhanced protein 2 | chr2:9357188-9357874 REVERSE LENGTH=202