MLOC_59094 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.43612.078312.010712.6242
LEAShoots from the seedlings (10 cm shoot stage)10.7856.87027.585757.25568
INF1Young developing inflorescences (5mm)25.406427.637128.614723.8995
INF2Developing inflorescences (1-1.5 cm)25.781830.990127.465832.2637
ROORoots from the seedlings (10 cm shoot stage)9.1264610.348610.646312.6056
NODDeveloping tillers at six leaf stage, 3rd internode5.68247.35699.4752624.9124
CAR5Developing grain, bracts removed (5 DPA)20.704820.953221.669121.3081
CAR15Developing grain, bracts removed (15 DPA)12.060711.013410.827.5445



CDS Structure of MLOC_59094






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59094.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365293NoneNoneNoneNone
MLOC_59094.1CUST_4080_PI427708080AvailableAvailablecontig_43263 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g45110.1 -3 0.0 1133 590/696 (85%) 13102.m05056 protein MT-A70 domain containing protein, expressed
TAIR PP10 AT4G10760.1 -3 0.0 737 414/683 (61%) | Symbols: EMB1706, MTA | mRNAadenosine methylase | chr4:6619947-6623312 REVERSE LENGTH=685