MLOC_59092 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.383918.016318.411914.7282
LEAShoots from the seedlings (10 cm shoot stage)28.521729.197530.705124.2021
INF1Young developing inflorescences (5mm)19.892219.016419.930914.8593
INF2Developing inflorescences (1-1.5 cm)18.514221.917719.248720.0842
ROORoots from the seedlings (10 cm shoot stage)10.88114.869913.596516.2325
NODDeveloping tillers at six leaf stage, 3rd internode13.146212.527314.319242.2798
CAR5Developing grain, bracts removed (5 DPA)15.577915.598616.926813.9706
CAR15Developing grain, bracts removed (15 DPA)6.641836.080876.8372413.0549



CDS Structure of MLOC_59092






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59092.8
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355860NoneNoneNoneNone
MLOC_59092.8CUST_4079_PI427708080AvailableAvailablecontig_43261 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g29120.2 -3 0.0 1032 553/704 (79%) 13106.m03006 protein STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
TAIR PP10 AT5G14720.1 -3 0.0 688 373/693 (54%) Protein kinase superfamily protein | chr5:4748212-4752642 REVERSE LENGTH=674