MLOC_5909 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 18.3643 | 11.6872 | 13.2712 | 15.3119 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.2723 | 14.2753 | 18.1762 | 13.4754 |
| INF1 | Young developing inflorescences (5mm) | 16.1124 | 19.5212 | 19.4832 | 17.074 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.9183 | 18.5304 | 19.3571 | 23.7837 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 24.4822 | 18.9812 | 15.5881 | 26.1703 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.12476 | 16.2025 | 18.2617 | 57.5549 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.2016 | 14.9506 | 14.4234 | 16.6252 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.6519 | 10.0378 | 10.5477 | 26.9301 |
CDS Structure of MLOC_5909
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5909.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g17170.1 |
-2 |
0.0 |
535 |
271/303 (89%) |
13103.m02052 protein zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT1G61620.1 |
-2 |
6e-161 |
459 |
229/307 (75%) |
phosphoinositide binding | chr1:22737653-22739209 FORWARD LENGTH=310 |
