- Predicted Gene MLOC_59078
MLOC_59078 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.21217 | 0.663708 | 0.781988 | 0.804945 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.45945 | 1.3007 | 0.469713 | 0.594284 |
| INF1 | Young developing inflorescences (5mm) | 1.3741 | 0.906305 | 0.17312 | 0.744794 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0453872 | 0.0645123 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.90248 | 2.45561 | 0.890468 | 2.43355 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.33253 | 3.59362 | 1.14587 | 7.31022 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.650817 | 0.114914 | 0.133857 | 0.291931 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0633566 | 0.171197 | 0.0900373 | 0.309989 |
CDS Structure of MLOC_59078
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59078.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g34790.1 |
+1 |
0.0 |
859 |
470/542 (87%) |
13108.m03641 protein AMP-binding domain containing protein, expressed |
| TAIR PP10 |
AT1G51680.1 |
+1 |
0.0 |
650 |
350/557 (63%) |
| Symbols: 4CL1, 4CL.1, AT4CL1 | 4-coumarate:CoA ligase 1 | chr1:19159007-19161464 REVERSE LENGTH=561 |