MLOC_59075 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.01863560.1331250.07358030.104393
LEAShoots from the seedlings (10 cm shoot stage)00.06168500.0985665
INF1Young developing inflorescences (5mm)0.2085290.2120810.2914630.214975
INF2Developing inflorescences (1-1.5 cm)0.06757130.08802210.05262790.0922956
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.05748610.04331650.004976470.11515
CAR5Developing grain, bracts removed (5 DPA)1.99382.260592.05842.36224
CAR15Developing grain, bracts removed (15 DPA)0.07438950.06577640.1745040.241026



CDS Structure of MLOC_59075






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59075.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59075.1CUST_13932_PI427708080AvailableAvailablecontig_43248 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g49200.1 -2 0.0 828 466/673 (69%) 13101.m05115 protein microtubule associated protein, putative, expressed
TAIR PP10 AT5G51600.1 -2 0.0 568 349/706 (49%) | Symbols: PLE, ATMAP65-3, MAP65-3 | Microtubule associated protein (MAP65/ASE1) family protein | chr5:20961061-20964080 REVERSE LENGTH=707