MLOC_59070 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.409564.279954.164583.90624
LEAShoots from the seedlings (10 cm shoot stage)24.714622.223812.623517.0142
INF1Young developing inflorescences (5mm)5.787276.760427.568535.49102
INF2Developing inflorescences (1-1.5 cm)3.672514.397295.877974.68241
ROORoots from the seedlings (10 cm shoot stage)0.7454056.025416.770986.24788
NODDeveloping tillers at six leaf stage, 3rd internode2.546332.644955.6148410.6058
CAR5Developing grain, bracts removed (5 DPA)0.3948860.4448290.4804130.419653
CAR15Developing grain, bracts removed (15 DPA)0.0224996000.0826393



CDS Structure of MLOC_59070






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59070.7
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249550.1NoneNoneNoneNone
MLOC_59070.7CUST_18184_PI427708080AvailableAvailablecontig_43190 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73580.1 -2 0.0 899 434/567 (77%) 13101.m08029 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT1G55120.1 -2 0.0 545 272/549 (50%) | Symbols: ATFRUCT5, AtcwINV3, FRUCT5 | beta-fructofuranosidase 5 | chr1:20566617-20569165 FORWARD LENGTH=594