MLOC_5907 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.169320.959921.480116.6058
LEAShoots from the seedlings (10 cm shoot stage)28.388821.441318.675218.341
INF1Young developing inflorescences (5mm)23.85522.437121.332416.6487
INF2Developing inflorescences (1-1.5 cm)23.109726.714124.216723.7299
ROORoots from the seedlings (10 cm shoot stage)12.508523.50216.884522.9658
NODDeveloping tillers at six leaf stage, 3rd internode14.915719.469419.675962.522
CAR5Developing grain, bracts removed (5 DPA)25.834624.368125.855621.064
CAR15Developing grain, bracts removed (15 DPA)5.65764.925865.3160510.3605



CDS Structure of MLOC_5907






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5907.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_5907.1CUST_13931_PI427708080AvailableAvailablecontig_136853 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g17180.1 +3 0.0 1291 708/752 (94%) 13103.m02054 protein ABC transporter, ATP-binding protein, putative, expressed
TAIR PP10 AT2G39480.1 +3 0.0 1028 567/753 (75%) | Symbols: PGP6 | P-glycoprotein 6 | chr2:16478249-16484827 REVERSE LENGTH=1407