MLOC_59055 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1003870.0292110.03900670.0513719
LEAShoots from the seedlings (10 cm shoot stage)0.1603420.2452570.3040940.204296
INF1Young developing inflorescences (5mm)0.3188330.2826660.2184940.259457
INF2Developing inflorescences (1-1.5 cm)0.05936880.2302320.1009620.188243
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.1900220.1725670.2539330.537325
CAR5Developing grain, bracts removed (5 DPA)0.2156540.09618040.1116940.150742
CAR15Developing grain, bracts removed (15 DPA)0.0843790.1486470.0765380.300421



CDS Structure of MLOC_59055






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59055.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372707NoneNoneNoneNone
MLOC_59055.2CUST_4072_PI427708080AvailableAvailablecontig_43229 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g39970.1 -1 0.0 1051 605/769 (79%) 13101.m04089 protein protein kinase domain containing protein, putative, expressed
TAIR PP10 AT5G12000.1 -1 0.0 638 393/711 (55%) Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr5:3874151-3876780 REVERSE LENGTH=701