MLOC_59047 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains43.817443.373840.890754.0539
LEAShoots from the seedlings (10 cm shoot stage)67.283642.99850.413555.7547
INF1Young developing inflorescences (5mm)24.795318.719620.001320.9223
INF2Developing inflorescences (1-1.5 cm)10.096212.068111.854415.1863
ROORoots from the seedlings (10 cm shoot stage)3.641426.401457.6768210.5141
NODDeveloping tillers at six leaf stage, 3rd internode26.683420.568717.209687.1048
CAR5Developing grain, bracts removed (5 DPA)31.396129.930333.257938.0662
CAR15Developing grain, bracts removed (15 DPA)3.670893.619162.88129.63342



CDS Structure of MLOC_59047






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59047.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59047.1CUST_13928_PI427708080AvailableAvailablecontig_43221 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g01970.5 -2 3e-146 422 218/249 (88%) 13105.m00143 protein NAD dependent epimerase/dehydratase family protein, putative, expressed
TAIR PP10 AT2G37660.1 -2 5e-137 399 204/250 (82%) NAD(P)-binding Rossmann-fold superfamily protein | chr2:15795481-15796977 REVERSE LENGTH=325