- Predicted Gene MLOC_59047
MLOC_59047 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59047_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59047_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 43.8174 | 43.3738 | 40.8907 | 54.0539 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 67.2836 | 42.998 | 50.4135 | 55.7547 |
INF1 | Young developing inflorescences (5mm) | 24.7953 | 18.7196 | 20.0013 | 20.9223 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.0962 | 12.0681 | 11.8544 | 15.1863 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.64142 | 6.40145 | 7.67682 | 10.5141 |
NOD | Developing tillers at six leaf stage, 3rd internode | 26.6834 | 20.5687 | 17.2096 | 87.1048 |
CAR5 | Developing grain, bracts removed (5 DPA) | 31.3961 | 29.9303 | 33.2579 | 38.0662 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.67089 | 3.61916 | 2.8812 | 9.63342 |
CDS Structure of MLOC_59047
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59047.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g01970.5 |
-2 |
3e-146 |
422 |
218/249 (88%) |
13105.m00143 protein NAD dependent epimerase/dehydratase family protein, putative, expressed |
TAIR PP10 |
AT2G37660.1 |
-2 |
5e-137 |
399 |
204/250 (82%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr2:15795481-15796977 REVERSE LENGTH=325 |