MLOC_59044 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.434096.494467.220226.87404
LEAShoots from the seedlings (10 cm shoot stage)8.886911.717882.732933.86062
INF1Young developing inflorescences (5mm)11.717116.613716.606312.7045
INF2Developing inflorescences (1-1.5 cm)13.29514.748412.130214.563
ROORoots from the seedlings (10 cm shoot stage)2.977044.418844.444975.16099
NODDeveloping tillers at six leaf stage, 3rd internode11.37597.0181610.3825.6584
CAR5Developing grain, bracts removed (5 DPA)9.308147.581328.954628.40867
CAR15Developing grain, bracts removed (15 DPA)0.7196570.5930490.9682741.6469



CDS Structure of MLOC_59044






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59044.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374616NoneNoneNoneNone
MLOC_59044.2CUST_18183_PI427708080AvailableAvailablecontig_43190 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g02810.1 +2 0.0 720 378/413 (92%) 13112.m00227 protein protein kinase domain containing protein, expressed
TAIR PP10 AT5G01020.1 +2 0.0 599 310/423 (73%) Protein kinase superfamily protein | chr5:6309-8270 REVERSE LENGTH=410