- Predicted Gene MLOC_59040
MLOC_59040 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 47.9757 | 40.9749 | 44.7075 | 38.7358 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 30.9684 | 21.6729 | 21.1837 | 18.3996 |
| INF1 | Young developing inflorescences (5mm) | 9.10958 | 5.2784 | 4.25959 | 4.96701 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.71521 | 3.27194 | 4.3757 | 3.23358 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 90.0236 | 55.3735 | 55.1101 | 60.4259 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 166.999 | 99.7543 | 163.551 | 299.15 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 63.8525 | 58.1213 | 61.803 | 52.2473 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.38571 | 10.3107 | 9.10046 | 20.9697 |
CDS Structure of MLOC_59040
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59040.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g06260.1 |
+3 |
1e-93 |
295 |
173/213 (81%) |
13112.m00638 protein harpin-induced protein 1 domain containing protein, expressed |
| TAIR PP10 |
AT3G44220.1 |
+3 |
3e-48 |
171 |
78/144 (54%) |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr3:15928216-15929645 FORWARD LENGTH=206 |