MLOC_59013 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.732554.943986.381845.14637
LEAShoots from the seedlings (10 cm shoot stage)7.128779.2547122.163311.2906
INF1Young developing inflorescences (5mm)0.9458461.287191.409591.00189
INF2Developing inflorescences (1-1.5 cm)0.7217420.8313620.9652610.874001
ROORoots from the seedlings (10 cm shoot stage)7.419889.445278.0639410.9961
NODDeveloping tillers at six leaf stage, 3rd internode13.3978.197624.0646925.0408
CAR5Developing grain, bracts removed (5 DPA)4.456164.411944.619484.24992
CAR15Developing grain, bracts removed (15 DPA)2.197612.069381.761054.72928



CDS Structure of MLOC_59013






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59013.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250383.1NoneNoneNoneNone
MLOC_59013.3CUST_4067_PI427708080AvailableAvailablecontig_43194 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g42030.1 +1 0.0 766 431/486 (89%) 13101.m04316 protein mitochondrial chaperone BCS1, putative, expressed
TAIR PP10 AT3G50930.1 +1 3e-139 439 233/429 (54%) | Symbols: BCS1 | cytochrome BC1 synthesis | chr3:18929817-18931547 FORWARD LENGTH=576