- Predicted Gene MLOC_59003
MLOC_59003 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59003_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59003_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.47988 | 0.7357 | 0.71803 | 0.763214 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.37652 | 0.600215 | 0.409034 | 0.868953 |
INF1 | Young developing inflorescences (5mm) | 16.7734 | 17.5135 | 15.2829 | 12.6098 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.7143 | 20.8735 | 18.1029 | 18.8403 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.14999 | 1.79557 | 2.44121 | 1.50088 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.72553 | 3.74788 | 2.40959 | 7.38684 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.16504 | 6.95486 | 6.80641 | 5.26067 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.527283 | 0.344386 | 0.329851 | 0.926899 |
CDS Structure of MLOC_59003
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59003.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g47180.1 |
+3 |
5e-71 |
231 |
122/181 (67%) |
13101.m04855 protein 3-5 exonuclease domain-containing protein, putative, expressed |
TAIR PP10 |
AT3G12410.1 |
+3 |
2e-23 |
99 |
65/194 (34%) |
Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:3946267-3946959 REVERSE LENGTH=230 |