MLOC_59001 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.06727520.1467850.2529150.0578361
LEAShoots from the seedlings (10 cm shoot stage)1.520073.757132.7251.81417
INF1Young developing inflorescences (5mm)2.043882.247333.400711.31643
INF2Developing inflorescences (1-1.5 cm)3.164562.139223.644072.25917
ROORoots from the seedlings (10 cm shoot stage)1.815391.933161.800931.6832
NODDeveloping tillers at six leaf stage, 3rd internode0.3353120.6188470.6178211.48938
CAR5Developing grain, bracts removed (5 DPA)0.1359130.1982590.1018640.111999
CAR15Developing grain, bracts removed (15 DPA)0.07848440.1164490.09430320.154578



CDS Structure of MLOC_59001






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59001.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59001.1CUST_17767_PI427708080AvailableAvailablecontig_43187 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g47030.1 -3 2e-135 429 244/379 (64%) 13102.m05290 protein expressed protein
TAIR PP10 AT1G32060.1 +2 6e-42 162 75/89 (84%) | Symbols: PRK | phosphoribulokinase | chr1:11532668-11534406 FORWARD LENGTH=395