MLOC_58999 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.072134.527294.986894.03482
LEAShoots from the seedlings (10 cm shoot stage)274.484542.038439.575344.666
INF1Young developing inflorescences (5mm)1.303351.241771.127741.34827
INF2Developing inflorescences (1-1.5 cm)0.5754651.174211.443031.35592
ROORoots from the seedlings (10 cm shoot stage)0.7543120.4773821.764340.901692
NODDeveloping tillers at six leaf stage, 3rd internode66.486264.402361.0245208.41
CAR5Developing grain, bracts removed (5 DPA)39.743345.651746.414140.6645
CAR15Developing grain, bracts removed (15 DPA)7.609310.14118.7564318.523



CDS Structure of MLOC_58999






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58999.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252870.1NoneNoneNoneNone
MLOC_58999.1CUST_4064_PI427708080AvailableAvailablecontig_43187 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g47020.1 +2 0.0 719 367/395 (93%) 13102.m05289 protein phosphoribulokinase/Uridine kinase family protein, expressed
TAIR PP10 AT1G32060.1 +2 0.0 639 314/344 (91%) | Symbols: PRK | phosphoribulokinase | chr1:11532668-11534406 FORWARD LENGTH=395