- Predicted Gene MLOC_58977
MLOC_58977 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.526 | 14.5102 | 13.0196 | 14.4763 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.3291 | 7.80221 | 10.0101 | 8.25296 |
| INF1 | Young developing inflorescences (5mm) | 28.4378 | 24.1968 | 25.2722 | 22.2534 |
| INF2 | Developing inflorescences (1-1.5 cm) | 22.3481 | 25.7672 | 26.0209 | 27.0855 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.44862 | 16.9868 | 15.0091 | 19.4403 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.78359 | 5.01486 | 7.94546 | 19.3554 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 16.2741 | 19.1557 | 20.3011 | 18.2664 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.68036 | 3.2216 | 3.44042 | 8.32903 |
CDS Structure of MLOC_58977
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58977.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g43250.1 |
-2 |
0.0 |
591 |
278/324 (86%) |
13101.m04466 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT1G64350.1 |
-2 |
8e-135 |
397 |
183/320 (57%) |
| Symbols: SEH1H | Transducin/WD40 repeat-like superfamily protein | chr1:23881582-23883073 FORWARD LENGTH=326 |