- Predicted Gene MLOC_58975
MLOC_58975 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.32211 | 10.498 | 9.27545 | 8.95386 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.4246 | 8.32255 | 7.27011 | 7.41154 |
| INF1 | Young developing inflorescences (5mm) | 23.795 | 20.4295 | 18.1838 | 17.3268 |
| INF2 | Developing inflorescences (1-1.5 cm) | 22.705 | 21.1992 | 20.4638 | 23.1515 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.12066 | 6.7814 | 5.19288 | 7.5336 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.321384 | 0.748252 | 2.93163 | 3.68745 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.7305 | 14.3899 | 15.7559 | 14.5206 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.82106 | 5.3569 | 4.78687 | 11.1597 |
CDS Structure of MLOC_58975
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58975.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g13150.1 |
-1 |
0.0 |
1407 |
738/947 (78%) |
13101.m01445 protein metallo-beta-lactamase family protein, putative, expressed |
| TAIR PP10 |
AT1G52160.1 |
-1 |
0.0 |
950 |
501/873 (57%) |
| Symbols: TRZ3 | tRNAse Z3 | chr1:19420911-19424419 REVERSE LENGTH=890 |
