- Predicted Gene MLOC_58960
MLOC_58960 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 138.574 | 113.247 | 102.113 | 121.779 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 50.5077 | 29.2536 | 34.3873 | 33.3257 |
| INF1 | Young developing inflorescences (5mm) | 160.833 | 153.317 | 155.479 | 134.038 |
| INF2 | Developing inflorescences (1-1.5 cm) | 88.9891 | 100.101 | 100.075 | 106.392 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 84.5533 | 101.32 | 101.471 | 123.321 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.84916 | 4.8363 | 15.9223 | 22.0104 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 130.48 | 139.641 | 138.035 | 135.417 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 38.8776 | 31.4087 | 32.0464 | 80.9199 |
CDS Structure of MLOC_58960
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58960.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g67134.1 |
+3 |
4e-167 |
481 |
265/291 (91%) |
13101.m07281 protein ribosomal L18p/L5e family protein, putative, expressed |
| TAIR PP10 |
AT3G25520.1 |
+3 |
3e-143 |
419 |
231/292 (79%) |
| Symbols: ATL5, PGY3, OLI5, RPL5A | ribosomal protein L5 | chr3:9269573-9271327 REVERSE LENGTH=301 |