MLOC_58957 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1568650.1170020.1786450.148838
LEAShoots from the seedlings (10 cm shoot stage)1.469050.3791560.9196490.744324
INF1Young developing inflorescences (5mm)0.01683430.020266800.0185821
INF2Developing inflorescences (1-1.5 cm)0.037249300.02144370.0475774
ROORoots from the seedlings (10 cm shoot stage)1.229190.7987160.9818720.996272
NODDeveloping tillers at six leaf stage, 3rd internode49.922639.055748.8104106.31
CAR5Developing grain, bracts removed (5 DPA)0.02260640.04331490.04160310.0420623
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_58957






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58957.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375655NoneNoneNoneNone
MLOC_58957.1CUST_4055_PI427708080AvailableAvailablecontig_43151 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g19310.1 +2 0.0 578 296/474 (62%) 13103.m02311 protein glycosyltransferase, putative, expressed
TAIR PP10 AT3G62720.2 +2 1e-152 452 207/347 (60%) | Symbols: ATXT1, XT1, XXT1 | xylosyltransferase 1 | chr3:23201326-23202708 FORWARD LENGTH=460