- Predicted Gene MLOC_58956
MLOC_58956 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58956_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58956_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 18.1726 | 31.0992 | 27.968 | 27.7194 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.5638 | 10.4801 | 8.46309 | 10.8432 |
INF1 | Young developing inflorescences (5mm) | 37.5496 | 42.698 | 37.3627 | 33.1205 |
INF2 | Developing inflorescences (1-1.5 cm) | 37.1268 | 36.9594 | 33.5076 | 39.5559 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.5414 | 19.249 | 19.4026 | 23.2649 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.7653 | 15.9397 | 17.8038 | 57.4106 |
CAR5 | Developing grain, bracts removed (5 DPA) | 30.8384 | 28.4122 | 28.3373 | 28.1249 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.4015 | 9.07632 | 10.9784 | 22.7158 |
CDS Structure of MLOC_58956
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58956.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g32530.1 |
-2 |
0.0 |
1678 |
806/970 (83%) |
13105.m03352 protein mannosylglycoprotein endo-beta-mannosidase, putative, expressed |
TAIR PP10 |
AT1G09010.1 |
-2 |
0.0 |
1379 |
669/964 (69%) |
glycoside hydrolase family 2 protein | chr1:2895259-2899287 REVERSE LENGTH=944 |