- Predicted Gene MLOC_58946
MLOC_58946 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 34.2645 | 42.0179 | 44.9254 | 38.6861 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 37.3447 | 37.0555 | 42.5592 | 32.2727 |
| INF1 | Young developing inflorescences (5mm) | 19.5348 | 22.2235 | 23.3753 | 16.9356 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.6596 | 18.4669 | 16.7303 | 18.5951 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 26.1655 | 37.0645 | 26.9433 | 39.9988 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 32.361 | 32.4984 | 32.103 | 109.502 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 40.7501 | 41.1236 | 43.0137 | 38.489 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.20104 | 5.64293 | 6.75558 | 13.0364 |
CDS Structure of MLOC_58946
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58946.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g36760.1 |
+2 |
0.0 |
842 |
404/468 (86%) |
13110.m03335 protein OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed |
| TAIR PP10 |
AT4G36195.3 |
+2 |
0.0 |
626 |
296/442 (67%) |
Serine carboxypeptidase S28 family protein | chr4:17127202-17129787 FORWARD LENGTH=488 |
