MLOC_58935 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.7191410.08412.292510.7184
LEAShoots from the seedlings (10 cm shoot stage)1.712421.550751.208111.26761
INF1Young developing inflorescences (5mm)0.03564810.1276330.04365640.064071
INF2Developing inflorescences (1-1.5 cm)0.01914130.01873940.02235150.0364225
ROORoots from the seedlings (10 cm shoot stage)6.457238.867755.439568.44549
NODDeveloping tillers at six leaf stage, 3rd internode1.277181.251320.6325943.05258
CAR5Developing grain, bracts removed (5 DPA)0.1234670.07127160.06792370.0994626
CAR15Developing grain, bracts removed (15 DPA)0.01509950.05443820.02147120.0871169



CDS Structure of MLOC_58935






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58935.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364838NoneNoneNoneNone
MLOC_58935.2CUST_18181_PI427708080AvailableAvailablecontig_43054 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g27304.1 +1 0.0 724 404/582 (69%) 13105.m02805 protein peptide transporter PTR2, putative, expressed
TAIR PP10 AT3G45680.1 +1 3e-142 432 243/557 (44%) Major facilitator superfamily protein | chr3:16770995-16772908 FORWARD LENGTH=558