- Predicted Gene MLOC_58906
MLOC_58906 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58906_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58906_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.63273 | 2.31549 | 2.54535 | 2.18123 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.28656 | 0.0901634 | 0.185079 | 0.139134 |
INF1 | Young developing inflorescences (5mm) | 2.75638 | 3.0802 | 2.99209 | 2.3977 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.39448 | 3.06439 | 2.31078 | 2.35961 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.1908 | 1.11197 | 1.07134 | 1.01643 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0815929 | 0.0507335 | 0.265727 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.64005 | 2.09835 | 1.50743 | 1.61412 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.092502 | 0.0377186 | 0.0878442 | 0.174799 |
CDS Structure of MLOC_58906
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58906.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g56700.1 |
-2 |
2e-57 |
192 |
159/193 (82%) |
13103.m06188 protein expressed protein |
TAIR PP10 |
AT3G12870.1 |
-2 |
8e-34 |
127 |
108/198 (55%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56120.1); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:4094417-4095037 REVERSE LENGTH=206 |