- Predicted Gene MLOC_58901
MLOC_58901 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 21.4702 | 22.6539 | 22.7103 | 23.1182 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 36.4719 | 8.26935 | 13.467 | 18.0779 |
| INF1 | Young developing inflorescences (5mm) | 16.1464 | 12.6771 | 12.5501 | 11.4134 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.98673 | 10.0695 | 11.6719 | 11.318 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.43682 | 17.1167 | 12.9219 | 20.1394 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 97.8885 | 80.7838 | 37.3369 | 268.494 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.3142 | 20.126 | 20.6272 | 19.8766 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.48236 | 1.02778 | 1.90755 | 3.08961 |
CDS Structure of MLOC_58901
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58901.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g36050.1 |
+2 |
3e-120 |
375 |
239/455 (53%) |
13106.m03723 protein expressed protein |
| TAIR PP10 |
AT2G22795.1 |
+2 |
3e-17 |
87 |
94/452 (21%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37820.1); Has 799854 Blast hits to 188815 proteins in 4452 species: Archae - 4529; Bacteria - 144236; Metazoa - 287749; Fungi - 87083; Plants - 43826; Viruses - 3662; Other Eukaryotes - 228769 (source: NCBI BLink). | chr2:9697380-9699584 REVERSE LENGTH=734 |