MLOC_58899 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.481973.259594.120253.34114
LEAShoots from the seedlings (10 cm shoot stage)3.04772.839583.45152.65617
INF1Young developing inflorescences (5mm)0.0517285000.0492887
INF2Developing inflorescences (1-1.5 cm)000.05924020.0443234
ROORoots from the seedlings (10 cm shoot stage)42.948714.18316.302322.4617
NODDeveloping tillers at six leaf stage, 3rd internode00.015963700.143436
CAR5Developing grain, bracts removed (5 DPA)000.06008520.0521675
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_58899






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58899.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371530NoneNoneNoneNone
MLOC_58899.1CUST_4038_PI427708080AvailableAvailablecontig_43093 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g08990.1 +1 2e-132 380 190/210 (90%) 13108.m00942 protein Cupin domain containing protein, expressed
TAIR PP10 AT5G39110.1 +1 3e-78 241 126/205 (61%) RmlC-like cupins superfamily protein | chr5:15657802-15658584 REVERSE LENGTH=222