- Predicted Gene MLOC_58899
MLOC_58899 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58899_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58899_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.48197 | 3.25959 | 4.12025 | 3.34114 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.0477 | 2.83958 | 3.4515 | 2.65617 |
INF1 | Young developing inflorescences (5mm) | 0.0517285 | 0 | 0 | 0.0492887 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0592402 | 0.0443234 |
ROO | Roots from the seedlings (10 cm shoot stage) | 42.9487 | 14.183 | 16.3023 | 22.4617 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0159637 | 0 | 0.143436 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0.0600852 | 0.0521675 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_58899
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58899.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g08990.1 |
+1 |
2e-132 |
380 |
190/210 (90%) |
13108.m00942 protein Cupin domain containing protein, expressed |
TAIR PP10 |
AT5G39110.1 |
+1 |
3e-78 |
241 |
126/205 (61%) |
RmlC-like cupins superfamily protein | chr5:15657802-15658584 REVERSE LENGTH=222 |