- Predicted Gene MLOC_58898
MLOC_58898 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.74052 | 6.11861 | 5.99349 | 5.72416 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.692 | 3.94317 | 3.5886 | 4.3926 |
| INF1 | Young developing inflorescences (5mm) | 9.83815 | 10.3198 | 10.6015 | 8.6179 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.4795 | 14.0009 | 15.1214 | 15.7962 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.57381 | 9.16159 | 8.57057 | 10.7778 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 20.4229 | 18.9449 | 21.9012 | 66.1944 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.69501 | 7.75423 | 8.93459 | 7.96993 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.92099 | 3.72911 | 3.69117 | 8.59759 |
CDS Structure of MLOC_58898
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58898.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g49820.1 |
-2 |
2e-64 |
234 |
122/266 (46%) |
13105.m05336 protein chloroplast unusual positioning protein, putative, expressed |
| TAIR PP10 |
AT1G48280.1 |
-2 |
7e-71 |
249 |
131/263 (50%) |
hydroxyproline-rich glycoprotein family protein | chr1:17835196-17837553 FORWARD LENGTH=558 |
