- Predicted Gene MLOC_58855
MLOC_58855 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58855_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58855_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 83.5548 | 74.6647 | 74.7189 | 80.2506 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 178.536 | 124.398 | 161.83 | 131.632 |
INF1 | Young developing inflorescences (5mm) | 53.9506 | 35.094 | 41.6381 | 38.2367 |
INF2 | Developing inflorescences (1-1.5 cm) | 17.3979 | 19.2908 | 20.5666 | 22.0236 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.49676 | 12.0271 | 19.8748 | 14.2989 |
NOD | Developing tillers at six leaf stage, 3rd internode | 67.016 | 43.746 | 52.1023 | 137.709 |
CAR5 | Developing grain, bracts removed (5 DPA) | 48.0236 | 51.8503 | 45.2751 | 51.0647 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.20762 | 2.61084 | 1.95439 | 5.58651 |
CDS Structure of MLOC_58855
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58855.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g22690.1 |
+1 |
2e-57 |
183 |
91/135 (67%) |
13106.m02439 protein bundle sheath defective protein 2, putative, expressed |
TAIR PP10 |
AT3G47650.1 |
+1 |
4e-37 |
130 |
60/102 (59%) |
DnaJ/Hsp40 cysteine-rich domain superfamily protein | chr3:17569576-17570262 FORWARD LENGTH=136 |