MLOC_58851 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.271611.938112.095111.2712
LEAShoots from the seedlings (10 cm shoot stage)3.437234.049767.225344.06812
INF1Young developing inflorescences (5mm)7.755488.005896.813056.47682
INF2Developing inflorescences (1-1.5 cm)4.545724.98064.541035.12127
ROORoots from the seedlings (10 cm shoot stage)15.92969.6835216.012112.826
NODDeveloping tillers at six leaf stage, 3rd internode0.8988171.267771.770924.18282
CAR5Developing grain, bracts removed (5 DPA)3.781894.744264.225144.17598
CAR15Developing grain, bracts removed (15 DPA)0.8657640.7533380.6141411.78946



CDS Structure of MLOC_58851






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58851.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371472NoneNoneNoneNone
MLOC_58851.1CUST_18180_PI427708080AvailableAvailablecontig_43054 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g29190.1 -3 0.0 620 301/331 (91%) 13109.m02891 protein phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplast precursor, putative, expressed
TAIR PP10 AT3G21110.2 -3 6e-175 519 243/330 (74%) | Symbols: PUR7, PURC | purin 7 | chr3:7402696-7405273 REVERSE LENGTH=411