- Predicted Gene MLOC_58847
MLOC_58847 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58847_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58847_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 405.438 | 319.762 | 292.396 | 354.871 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 169.18 | 94.9872 | 114.919 | 106.159 |
INF1 | Young developing inflorescences (5mm) | 460.22 | 447.179 | 519.568 | 443.669 |
INF2 | Developing inflorescences (1-1.5 cm) | 410.09 | 417.249 | 474.357 | 492.312 |
ROO | Roots from the seedlings (10 cm shoot stage) | 339.196 | 354.432 | 431.141 | 418.649 |
NOD | Developing tillers at six leaf stage, 3rd internode | 30.0992 | 38.8302 | 109.887 | 154.356 |
CAR5 | Developing grain, bracts removed (5 DPA) | 237.854 | 265.754 | 227.665 | 251.738 |
CAR15 | Developing grain, bracts removed (15 DPA) | 44.7495 | 40.1064 | 44.5598 | 108.088 |
CDS Structure of MLOC_58847
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58847.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g01870.1 |
-3 |
1e-115 |
337 |
176/189 (93%) |
13107.m00106 protein ribosomal protein L13, putative, expressed |
TAIR PP10 |
AT5G48760.2 |
-3 |
2e-104 |
307 |
160/189 (85%) |
Ribosomal protein L13 family protein | chr5:19771315-19772686 REVERSE LENGTH=206 |