- Predicted Gene MLOC_58842
MLOC_58842 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 45.9077 | 29.6121 | 34.1038 | 32.2705 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 32.7919 | 26.449 | 30.4817 | 23.2362 |
| INF1 | Young developing inflorescences (5mm) | 52.8832 | 58.9114 | 63.6255 | 42.12 |
| INF2 | Developing inflorescences (1-1.5 cm) | 44.276 | 47.2895 | 42.8623 | 44.0464 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 37.6493 | 41.6365 | 36.6752 | 42.4087 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 26.5288 | 27.3346 | 36.5924 | 85.2506 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 31.0484 | 33.8219 | 34.0514 | 27.9796 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 12.2929 | 12.3877 | 13.2455 | 24.7721 |
CDS Structure of MLOC_58842
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58842.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g36700.1 |
-2 |
0.0 |
619 |
389/405 (96%) |
13104.m03548 protein proteasome subunit, putative, expressed |
| TAIR PP10 |
AT1G29150.1 |
-2 |
0.0 |
542 |
340/402 (85%) |
| Symbols: ATS9, RPN6 | non-ATPase subunit 9 | chr1:10181240-10182499 FORWARD LENGTH=419 |