- Predicted Gene MLOC_58840
MLOC_58840 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.241272 | 0.405087 | 0.356262 | 0.367055 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0764384 | 0.376712 | 0.752201 | 0.323929 |
| INF1 | Young developing inflorescences (5mm) | 0.0187388 | 0.0225557 | 0 | 0.0201312 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0199185 | 0 | 0.0234478 | 0.0418977 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.90149 | 1.2097 | 0.973917 | 1.29133 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0628147 | 0.193142 | 0.00650898 | 0.358633 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.15343 | 0.098869 | 0.0703047 | 0.111916 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0644079 | 0.0194062 | 0.0229902 | 0.105016 |
CDS Structure of MLOC_58840
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58840.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g36710.1 |
+2 |
0.0 |
640 |
353/472 (75%) |
13104.m03549 protein methyltransferase domain containing protein |
| TAIR PP10 |
AT5G40830.2 |
+2 |
7e-70 |
235 |
158/428 (37%) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:16354611-16355855 REVERSE LENGTH=414 |