MLOC_5883 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.2085 | 10.0335 | 10.5564 | 10.1859 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.41617 | 0.354844 | 0.480838 | 1.29267 |
| INF1 | Young developing inflorescences (5mm) | 16.8098 | 14.716 | 14.9031 | 12.2275 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.68735 | 8.25575 | 9.65903 | 8.78418 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.33555 | 6.98525 | 11.0035 | 7.93335 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.125744 | 0.114339 | 0.133608 | 0.336302 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.04552 | 4.1272 | 4.24383 | 3.83775 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.8255 | 1.13368 | 0.529135 | 2.09585 |
CDS Structure of MLOC_5883
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5883.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g08640.1 |
-1 |
0.0 |
617 |
320/352 (91%) |
13103.m01000 protein ORC2 - Putative origin recognition complex subunit 2, expressed |
| TAIR PP10 |
AT2G37560.1 |
-1 |
6e-144 |
432 |
215/352 (61%) |
| Symbols: ORC2, ATORC2 | origin recognition complex second largest subunit 2 | chr2:15759568-15761116 FORWARD LENGTH=363 |
