MLOC_58814 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.547611.134310.761312.1085
LEAShoots from the seedlings (10 cm shoot stage)31.463441.372951.436833.9943
INF1Young developing inflorescences (5mm)4.951735.65814.95484.89846
INF2Developing inflorescences (1-1.5 cm)2.798483.912242.900514.11232
ROORoots from the seedlings (10 cm shoot stage)6.643985.86185.123496.83089
NODDeveloping tillers at six leaf stage, 3rd internode12.107717.140315.712544.9858
CAR5Developing grain, bracts removed (5 DPA)13.925216.871514.93117.1614
CAR15Developing grain, bracts removed (15 DPA)0.9388471.749481.188543.85929



CDS Structure of MLOC_58814






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58814.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_58814.1CUST_13895_PI427708080AvailableAvailablecontig_43024 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g43430.1 -3 3e-15 73 35/38 (92%) 13103.m04668 protein mttA/Hcf106 family protein, putative, expressed
TAIR PP10 AT5G28750.1 -3 1e-14 70 33/38 (87%) Bacterial sec-independent translocation protein mttA/Hcf106 | chr5:10784142-10785677 REVERSE LENGTH=147